List of Figures ................................................ xi
List of Tables ................................................ xxi
Preface ....................................................... xxv
Editor ...................................................... xxvii
I Trends in HPC ................................................. 1
1 Contemporary High Performance Computing ...................... 3
Jeffrey S. Vetter
2 HPC Challenge: Design, History, and Implementation
Highlights .................................................. 13
Jack Dongarra and Piotr Luszczek
3 The Green500 List: A Look Back to Look Forward .............. 31
Wu-chun Feng, Kirk Cameron, and Thomas Scogland
II Contemporary HPC ............................................ 43
4 Tera 100 .................................................... 45
Mickaël Amiet, Patrick Carribault, Elisabeth Charon,
Guillaume Colin de Verdière, Philippe Deniel, Gilles
Grospellier, Guénolé Harel, François Jollet, Jacques-
Charles Lafoucrière, Jacques-Bernard Lekien, Stéphane
Mathieu, Marc Pérache, Jean-Christophe Weill, and Gilles
Wiber
5 The Mole-8.5 Supercomputing System .......................... 75
Xiaowei Wang and Wei Ge
6 Supercomputing in the DoD High Performance Computing
Modernization Program ....................................... 99
John E. West, Roy L. Campbell, and Larry P. Davis
7 Keeneland: Computational Science Using Heterogeneous GPU
Computing .................................................. 123
Jeffrey S. Vetter, Richard Glassbrook, Karsten Schwan,
Sudhakar Yalamanchili, Mitch Horton, Ada Gavrilovska,
Magda Slawinska, Jack Dongarra, Jeremy Meredith, Philip
С. Roth, Kyle Spafford, Stanimire Tomov, and John
Wynkoop
8 Blue Gene/P: JUGENE ........................................ 153
Norbert Attig, Jutta Docter, Wolfgang Frings, Johannes
Grotendorst, Inge Gutheil, Florian Janetzko, Olaf Mextorf
Bernd Mohr, Michael Stephan, Klaus Wolkersdorf er, Lothar
Wollschläger, Stefan Krieg, and Thomas Lippert
9 Roadrunner: The Dawn of Accelerated Computing Sriram
Swaminarayan ............................................... 189
10 Blue Gene/Q: Sequoia and Mira .............................. 225
William E. Allcock, Charles Bacon, Anna Maria Bailey,
Raymond Bair, Ramesh Balakrishnan, Adam Bertsch, Barna
Bihari, Brian Carnes, Dong Chen, George L.T. Chiu,
Richard Coffey, Susan Coghlan, Paul W. Coteus, Kimberly
Cupps, Erik W. Draeger, Larry Fried, Thomas W. Fox, Mark
Gary, James N. Glosli, Thomas Gooding, John A. Gunnels,
John C. Gyllenhaal, Jeff Hammond, Ruud A. Haring, Philip
Heidelberger, Mark Hereid, Todd Inglett, Kyu-hyoun Kim,
Kalyan Kumaran, Steven Langer, Amith R. Mamidala, Rose
McCallen, Paul Messina, Sam Miller, Arthur A. Mirin,
Vitali Morozov, Fady Najjar, Mike Nelson, Albert
Nichols, Martin Ohmacht, Michael E. Papka, Fabrizio
Petrini, Kyung Dong Ryu, Terri Quinn, David Richards,
Katherine M. Riley, Nichols A. Romero, Andrew A. Schram,
Robert Shearer, Tom Spelce, Becky Springmeyer, Fred
Streitz, Bronis de Supinski, Pavlos Vranas, Robert
E. Walkup, Amy Wang, Timothy J. Williams, and Robert
W. Wisniewski
11 "Lomonosov": Supercomputing at Moscow State University ..... 283
Victor Sadovnichy, Alexander Tikhonravov, Vladimir
Voevodin, and Vsevolod Opanasenko
12 Pleiades: NASA's First Petascale Supercomputer ............. 309
Rupak Biswas, William Thigpen, Robert Ciotti, Piyush
Mehrotra, Chris Henze, John Parks, Bryan Biegel, and
Robert Hood
13 The Blue Waters Super-System for Super-Science ............. 339
Brett Bode, Michelle Butler, Thorn Dunning, Torsten
Hoefler, William Kramer, William Gropp, and Wen-mei Hwu
14 Kraken: The First Academic Petaflop Computer ............... 367
Mark R. Fahey, Lonnie D. Crosby, Gary L. Rogers, and
Victor G. Hazlewood
15 Titan: 20-Petaflop Cray XK7 at Oak Ridge National
Laboratory ................................................. 399
Arthur Bland, Wayne Joubert, Don Maxwell, Norbert
Podhorszki, Jim Rogers, Galen Shipman, and Arnold
Tharrington
16 Blacklight: Coherent Shared Memory for Enabling Science .... 421
Nick Nystrom, Joel Welling, Phil Blood, and Eng Lim Goh
17 Gordon: A Novel Architecture for Data Intensive Computing .. 441
Pietro Cicotti, Michael Norman, Robert S. Sinkovits,
Shawn Strande, and Allan Snavely
18 Monte Rosa: Architectural Features and a Path Toward
Exascale ................................................... 473
Sadaf R. Alam, Gilles Fourestey, Maria Grazia Giuffreda,
and Colin McMurtrie
19 Tianhe-1A Supercomputer: System and Application ............ 499
Xiangke Liao, Yutong Lu, and Min Xie
20 TSUBAME 2.0: The First Petascale Supercomputer in Japan
and the Greatest Production in the World ................... 525
Satoshi Matsuoka, Takayuki Aoki, Toshio Endo, Hitoshi
Sato, Shin'ichiro Takizawa, Akihiko Nomura, and Kento
Sato
21 HA-PACS: A Highly Accelerated Parallel Advanced System
for Computational Sciences ................................. 557
Taisuke Boku, Toshihiro Hanawa, Yoshinobu Kuramashi,
Kohji Yoshikawa, Mitsuo Shoji, Yuetsu Kodama, Mitsuhisa
Sato, and Masayuki Umemura
III Clouds and Grids in HPC ................................... 573
22 Magellan: A Testbed to Explore Cloud Computing for
Science .................................................... 575
Lavanya Ramakrishnan, Iwona Sakrejda, Shane Canon,
Krishna Muriki, Nicholas J. Wright, Adam Scovel, Susan
Coghlan, Anping Liu, and Devarshi Ghoshal
23 Future Grid: A Reconfigurable Testbed for Cloud, HPC, and
Grid Computing ............................................. 603
Geoffrey C. Fox, Gregor von Laszewski, Javier Diaz, Kate
Keahey, Jose Fortes, Renato Figueiredo, Shava Smallen,
Warren Smith, and Andrew Grimshaw
24 LLGrid: Supercomputer for Sensor Processing ................ 637
Jeremy Kepner, William Arcand, Nadya Bliss, David Bestor,
Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie
Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, and
Charles Yee
Bibliography .................................................. 647
Index ......................................................... 693
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